Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 USP9YP35-201ENST00000435696 412 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 RNA5SP404-201ENST00000517118 132 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC073569.3-201ENST00000619055 682 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 RNU6-45P-201ENST00000384471 107 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 RNA5SP212-201ENST00000391223 107 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 MTCYBP24-201ENST00000420387 1106 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 PTENP1-201ENST00000447117 1215 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 MTND5P8-201ENST00000449817 1083 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 PSMC1P5-201ENST00000512850 177 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC010186.2-204ENST00000537668 439 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 MTRNR2L2-201ENST00000604882 87 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 DUXAP10-204ENST00000612052 616 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC097372.5-201ENST00000623665 376 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AL138880.1-201ENST00000405824 642 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC096920.1-201ENST00000423991 241 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 RPL31P3-201ENST00000458430 332 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC087588.1-201ENST00000462203 316 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC015908.1-201ENST00000478739 476 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 MIR5571-201ENST00000577998 113 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 SNORD114-15-201ENST00000364687 72 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 RNA5SP63-201ENST00000391225 112 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 RNU6-775P-201ENST00000459318 96 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC106800.4-201ENST00000614905 153 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 AC010329.5-201ENST00000623497 2174 ntBASIC0.18□□□□□ -2.38
VPS13DQ5THJ4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 MTND1P16-201ENST00000465177 898 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC147055.4-201ENST00000504399 745 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AL590705.4-201ENST00000532209 134 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 BNIP3P26-201ENST00000600827 554 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AL161629.2-201ENST00000615347 275 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 RPL37P21-201ENST00000435890 276 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC090666.1-201ENST00000578241 445 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AP006248.3-201ENST00000623580 594 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 SNORA68.1-201ENST00000364537 132 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 RPL23AP95-201ENST00000426806 265 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 Z83818.1-201ENST00000603584 150 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC004852.3-201ENST00000614131 326 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 MIR767-201ENST00000390228 109 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AL356421.1-201ENST00000403255 413 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 SYPL1P1-201ENST00000473622 768 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 MIR4493-201ENST00000584016 73 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AL078605.1-201ENST00000603529 500 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 AC006001.4-201ENST00000622243 395 ntBASIC0.17□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.67-201ENST00000362870 100 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 RNA5SP240-201ENST00000365355 128 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 RNU6-968P-201ENST00000384076 107 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 RNA5SP266-201ENST00000410273 108 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 RPL7P29-201ENST00000437151 728 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL354941.1-201ENST00000438600 464 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL161788.1-201ENST00000441805 169 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 RNU6-322P-201ENST00000516010 103 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AC018659.1-201ENST00000551083 169 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AC134026.1-201ENST00000623249 2239 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.324-201ENST00000365165 102 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 MIR214-201ENST00000385214 110 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AC098614.2-201ENST00000426040 255 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 CIR1P1-201ENST00000524055 1133 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.142-201ENST00000363491 102 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 SNORA48.10-201ENST00000516965 160 ntBASIC0.16□□□□□ -2.38
VPS13DQ5THJ4 SNORA51.6-201ENST00000384151 125 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 RNU6-43P-201ENST00000384302 107 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AC009518.2-201ENST00000418056 731 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AL589880.1-201ENST00000448271 287 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AC112492.4-201ENST00000456549 352 ntBASIC0.15□□□□□ -2.38
VPS13DQ5THJ4 AC114982.1-201ENST00000469402 321 ntBASIC0.15□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms