Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPE65Q16518 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPE65Q16518 FTLP6-201ENST00000355274 422 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPE65Q16518 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPE65Q16518 RNU6-434P-201ENST00000384376 107 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 RNU6-1035P-201ENST00000384477 107 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 MIR514A2-201ENST00000385131 88 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 MIR514A3-201ENST00000385132 88 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AL356776.1-201ENST00000406574 447 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 RNU4-26P-201ENST00000410270 107 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 RNU6-1025P-201ENST00000410629 104 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.18□□□□□ -1.9
RPE65Q16518 RPL30P16-201ENST00000419341 429 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 RPL31P12-201ENST00000422587 358 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 SETP5-201ENST00000437270 562 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 RPS3AP12-201ENST00000443616 753 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 MTND4P18-201ENST00000447010 465 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 RPS15AP27-201ENST00000449183 343 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 MTCYBP18-201ENST00000501056 747 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC018710.1-201ENST00000506509 158 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.18□□□□□ -1.9
RPE65Q16518 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.18□□□□□ -1.9
RPE65Q16518 AC074344.1-201ENST00000512823 224 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.18□□□□□ -1.9
RPE65Q16518 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.18□□□□□ -1.9
RPE65Q16518 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.18□□□□□ -1.9
RPE65Q16518 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.18□□□□□ -1.9
RPE65Q16518 RNU6-89P-201ENST00000606519 100 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 U2.17-201ENST00000611454 95 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC006504.8-201ENST00000621046 635 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 PLCE1P1-201ENST00000622094 305 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.18□□□□□ -1.9
RPE65Q16518 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.18□□□□□ -1.9
RPE65Q16518 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.18□□□□□ -1.9
RPE65Q16518 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 AC100810.6-201ENST00000638068 285 ntBASIC3.18□□□□□ -1.9
RPE65Q16518 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPE65Q16518 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPE65Q16518 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPE65Q16518 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RPE65Q16518 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPE65Q16518 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
RPE65Q16518 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNU6-332P-201ENST00000391193 108 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNU6-55P-201ENST00000411092 107 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNU6-954P-201ENST00000411355 107 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.17□□□□□ -1.9
RPE65Q16518 RPL21P90-201ENST00000415692 466 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 SRIP2-201ENST00000428470 166 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 MTND3P10-201ENST00000450967 341 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RPL12P25-201ENST00000455592 494 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.17□□□□□ -1.9
RPE65Q16518 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
RPE65Q16518 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.17□□□□□ -1.9
RPE65Q16518 MTCO3P9-201ENST00000506989 781 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 PHBP14-201ENST00000512887 367 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 RNU6-928P-201ENST00000516876 104 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.17□□□□□ -1.9
RPE65Q16518 AC134698.4-201ENST00000523451 826 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 CENPUP1-201ENST00000526649 1202 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC078814.3-201ENST00000553036 491 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.17□□□□□ -1.9
RPE65Q16518 AL035413.2-201ENST00000604801 525 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 Z82243.1-201ENST00000609432 473 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 DUSP12P1-201ENST00000612874 516 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 U6.42-201ENST00000618440 107 ntBASIC3.17□□□□□ -1.9
RPE65Q16518 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPE65Q16518 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
RPE65Q16518 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPE65Q16518 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPE65Q16518 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
RPE65Q16518 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RPE65Q16518 MTND4P35-201ENST00000604257 1375 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPE65Q16518 Y_RNA.86-201ENST00000363020 111 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 Y_RNA.160-201ENST00000363677 92 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.16□□□□□ -1.9
RPE65Q16518 SNORA9-201ENST00000384215 133 ntBASIC3.16□□□□□ -1.9
RPE65Q16518 MT-TL1-201ENST00000386347 75 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms