Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL603758.1-201ENST00000618654 241 ntBASIC2.64□□□□□ -1.99
LMO4P61968 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LMO4P61968 AC006111.3-201ENST00000622137 383 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AL136313.1-201ENST00000624804 202 ntBASIC2.64□□□□□ -1.99
LMO4P61968 AL133216.2-202ENST00000634512 349 ntBASIC2.64□□□□□ -1.99
LMO4P61968 MIR4275-201ENST00000636486 87 ntBASIC2.64□□□□□ -1.99
LMO4P61968 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LMO4P61968 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMO4P61968 AC118273.1-201ENST00000525324 3006 ntBASIC2.63□□□□□ -1.99
LMO4P61968 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 AL139276.1-201ENST00000311910 1001 ntBASIC2.63□□□□□ -1.99
LMO4P61968 MIR423-201ENST00000362201 94 ntBASIC2.63□□□□□ -1.99
LMO4P61968 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 UBE2V1P2-201ENST00000397758 440 ntBASIC2.63□□□□□ -1.99
LMO4P61968 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 RNU4-26P-201ENST00000410270 107 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RNU2-36P-201ENST00000410361 191 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RNU2-39P-201ENST00000410604 198 ntBASIC2.63□□□□□ -1.99
LMO4P61968 BTF3L4P3-201ENST00000418879 476 ntBASIC2.63□□□□□ -1.99
LMO4P61968 MTND2P23-201ENST00000422990 651 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 AL353729.1-201ENST00000425044 720 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 CST9LP2-201ENST00000437612 320 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RPL26P6-201ENST00000440913 438 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 AL118520.1-201ENST00000450770 291 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 PPP1R2P5-201ENST00000457256 603 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL162395.1-201ENST00000457882 422 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RNU7-182P-201ENST00000459009 62 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RPL21P99-201ENST00000480369 423 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL049873.1-201ENST00000480540 376 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 AC008885.1-201ENST00000514930 301 ntBASIC2.63□□□□□ -1.99
LMO4P61968 RN7SKP256-201ENST00000517201 314 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 AP000889.1-201ENST00000530968 660 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 AP002404.1-201ENST00000532005 451 ntBASIC2.63□□□□□ -1.99
LMO4P61968 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 AL121821.2-201ENST00000556081 394 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.63□□□□□ -1.99
LMO4P61968 MIR4703-201ENST00000577728 79 ntBASIC2.63□□□□□ -1.99
LMO4P61968 MIR4424-201ENST00000585257 86 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AL162730.1-201ENST00000605734 292 ntBASIC2.63□□□□□ -1.99
LMO4P61968 uc_338.25-201ENST00000613756 156 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AC130324.3-201ENST00000614165 542 ntBASIC2.63□□□□□ -1.99
LMO4P61968 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
LMO4P61968 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.63□□□□□ -1.99
LMO4P61968 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 AC008568.2-201ENST00000623862 2313 ntBASIC2.63□□□□□ -1.99
LMO4P61968 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMO4P61968 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.63□□□□□ -1.99
LMO4P61968 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LMO4P61968 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 AL353746.1-201ENST00000566293 6881 ntBASIC2.62□□□□□ -1.99
LMO4P61968 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMO4P61968 MIR30E-201ENST00000362104 92 ntBASIC2.62□□□□□ -1.99
LMO4P61968 Y_RNA.100-201ENST00000363141 102 ntBASIC2.62□□□□□ -1.99
LMO4P61968 RNU4-66P-201ENST00000365199 138 ntBASIC2.62□□□□□ -1.99
LMO4P61968 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.62□□□□□ -1.99
LMO4P61968 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.62□□□□□ -1.99
LMO4P61968 RNU6-637P-201ENST00000384050 107 ntBASIC2.62□□□□□ -1.99
LMO4P61968 RNU6-76P-201ENST00000384060 104 ntBASIC2.62□□□□□ -1.99
LMO4P61968 RNU6-1029P-201ENST00000384109 107 ntBASIC2.62□□□□□ -1.99
LMO4P61968 RPS4XP3-201ENST00000398541 413 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL606923.1-201ENST00000406616 190 ntBASIC2.62□□□□□ -1.99
LMO4P61968 Z98941.1-201ENST00000407764 100 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL451054.2-201ENST00000420896 202 ntBASIC2.62□□□□□ -1.99
LMO4P61968 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.62□□□□□ -1.99
LMO4P61968 AC090774.1-201ENST00000435925 246 ntBASIC2.62□□□□□ -1.99
LMO4P61968 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
LMO4P61968 AC016696.1-201ENST00000446949 318 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.62□□□□□ -1.99
LMO4P61968 RNU7-180P-201ENST00000459240 63 ntBASIC2.62□□□□□ -1.99
LMO4P61968 SNORD19B-201ENST00000459623 84 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AL049830.2-201ENST00000480072 201 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC096576.1-201ENST00000489014 359 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.62□□□□□ -1.99
LMO4P61968 FAM206BP-201ENST00000510179 541 ntBASIC2.62□□□□□ -1.99
LMO4P61968 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.62□□□□□ -1.99
LMO4P61968 RNU2-10P-201ENST00000516375 211 ntBASIC2.62□□□□□ -1.99
LMO4P61968 RNU6-64P-201ENST00000517119 105 ntBASIC2.62□□□□□ -1.99
LMO4P61968 HMGN1P28-201ENST00000521340 364 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms