Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BET1P1-201ENST00000482276 359 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.63□□□□□ -1.99
VCPP55072 MTND5P13-201ENST00000513046 1079 ntBASIC2.63□□□□□ -1.99
VCPP55072 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
VCPP55072 RNA5SP291-201ENST00000517222 105 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.63□□□□□ -1.99
VCPP55072 AC107934.1-201ENST00000522215 217 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.63□□□□□ -1.99
VCPP55072 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.63□□□□□ -1.99
VCPP55072 MIR1273D-201ENST00000577266 86 ntBASIC2.63□□□□□ -1.99
VCPP55072 MIR3118-1-201ENST00000581787 76 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.63□□□□□ -1.99
VCPP55072 AL359999.1-201ENST00000604513 294 ntBASIC2.63□□□□□ -1.99
VCPP55072 AL161729.4-201ENST00000604650 476 ntBASIC2.63□□□□□ -1.99
VCPP55072 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.63□□□□□ -1.99
VCPP55072 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC068057.2-201ENST00000624047 895 ntBASIC2.63□□□□□ -1.99
VCPP55072 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCPP55072 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VCPP55072 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCPP55072 MTND4P4-201ENST00000439033 1366 ntBASIC2.62□□□□□ -1.99
VCPP55072 RNU6-1159P-201ENST00000362933 107 ntBASIC2.62□□□□□ -1.99
VCPP55072 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.62□□□□□ -1.99
VCPP55072 MT-TH-201ENST00000387441 69 ntBASIC2.62□□□□□ -1.99
VCPP55072 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCPP55072 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
VCPP55072 RNU2-62P-201ENST00000410868 191 ntBASIC2.62□□□□□ -1.99
VCPP55072 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCPP55072 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 AL356583.2-201ENST00000426536 280 ntBASIC2.62□□□□□ -1.99
VCPP55072 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.62□□□□□ -1.99
VCPP55072 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
VCPP55072 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.62□□□□□ -1.99
VCPP55072 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 USP9YP12-201ENST00000450481 570 ntBASIC2.62□□□□□ -1.99
VCPP55072 MRPS17P3-201ENST00000465453 385 ntBASIC2.62□□□□□ -1.99
VCPP55072 MTND3P7-201ENST00000474435 343 ntBASIC2.62□□□□□ -1.99
VCPP55072 RBM43P1-201ENST00000476891 1081 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC022634.1-201ENST00000520765 532 ntBASIC2.62□□□□□ -1.99
VCPP55072 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.62□□□□□ -1.99
VCPP55072 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.62□□□□□ -1.99
VCPP55072 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.62□□□□□ -1.99
VCPP55072 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.62□□□□□ -1.99
VCPP55072 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
VCPP55072 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.62□□□□□ -1.99
VCPP55072 AC012065.4-201ENST00000602445 679 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC138749.5-201ENST00000611461 208 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC104237.2-201ENST00000612456 443 ntBASIC2.62□□□□□ -1.99
VCPP55072 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.62□□□□□ -1.99
VCPP55072 uc_338.12-201ENST00000616344 181 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC116165.2-201ENST00000616705 206 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC092140.2-201ENST00000618027 521 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC009878.1-201ENST00000621819 340 ntBASIC2.62□□□□□ -1.99
VCPP55072 AC091953.2-201ENST00000623979 160 ntBASIC2.62□□□□□ -1.99
VCPP55072 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.62□□□□□ -1.99
VCPP55072 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCPP55072 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
VCPP55072 ADAM3A-203ENST00000461344 2157 ntBASIC2.61□□□□□ -1.99
VCPP55072 AC092104.1-201ENST00000497346 1441 ntBASIC2.61□□□□□ -1.99
VCPP55072 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCPP55072 RNY4P16-201ENST00000364768 94 ntBASIC2.61□□□□□ -1.99
VCPP55072 SNORD116-8-201ENST00000384365 95 ntBASIC2.61□□□□□ -1.99
VCPP55072 FCF1P10-201ENST00000407590 479 ntBASIC2.61□□□□□ -1.99
VCPP55072 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.61□□□□□ -1.99
VCPP55072 ZNF863P-201ENST00000426746 417 ntBASIC2.61□□□□□ -1.99
VCPP55072 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.61□□□□□ -1.99
VCPP55072 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.61□□□□□ -1.99
VCPP55072 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
VCPP55072 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.61□□□□□ -1.99
VCPP55072 AC116337.1-201ENST00000509680 687 ntBASIC2.61□□□□□ -1.99
VCPP55072 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
VCPP55072 SNORA31.18-201ENST00000517043 134 ntBASIC2.61□□□□□ -1.99
VCPP55072 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCPP55072 AC022878.1-201ENST00000530684 149 ntBASIC2.61□□□□□ -1.99
VCPP55072 OR5BN1P-201ENST00000532955 829 ntBASIC2.61□□□□□ -1.99
VCPP55072 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.61□□□□□ -1.99
VCPP55072 AC008088.1-201ENST00000580993 280 ntBASIC2.61□□□□□ -1.99
VCPP55072 NRBF2P1-201ENST00000587407 859 ntBASIC2.61□□□□□ -1.99
VCPP55072 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.61□□□□□ -1.99
VCPP55072 DPPA3P3-201ENST00000603842 430 ntBASIC2.61□□□□□ -1.99
VCPP55072 AC112191.3-201ENST00000604371 277 ntBASIC2.61□□□□□ -1.99
VCPP55072 MTND4LP5-201ENST00000605152 292 ntBASIC2.61□□□□□ -1.99
VCPP55072 AC008498.1-201ENST00000613012 531 ntBASIC2.61□□□□□ -1.99
VCPP55072 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.61□□□□□ -1.99
VCPP55072 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCPP55072 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCPP55072 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VCPP55072 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.6□□□□□ -1.99
VCPP55072 Y_RNA.40-201ENST00000362645 93 ntBASIC2.6□□□□□ -1.99
VCPP55072 RNU4-21P-201ENST00000362802 126 ntBASIC2.6□□□□□ -1.99
VCPP55072 RN7SKP226-201ENST00000364912 300 ntBASIC2.6□□□□□ -1.99
VCPP55072 RNU1-73P-201ENST00000383971 164 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms