Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 RNU7-23P-201ENST00000459465 62 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC087879.1-201ENST00000474343 374 ntBASIC0.27□□□□□ -2.37
HTTP42858 HMGB1P14-201ENST00000557424 591 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC016925.2-201ENST00000605108 242 ntBASIC0.27□□□□□ -2.37
HTTP42858 AL355472.4-201ENST00000610233 626 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC025594.3-201ENST00000613068 790 ntBASIC0.27□□□□□ -2.37
HTTP42858 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.27□□□□□ -2.37
HTTP42858 U3.13-201ENST00000364804 214 ntBASIC0.27□□□□□ -2.37
HTTP42858 RNU6-45P-201ENST00000384471 107 ntBASIC0.27□□□□□ -2.37
HTTP42858 SNORA8-201ENST00000384574 139 ntBASIC0.27□□□□□ -2.37
HTTP42858 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.27□□□□□ -2.37
HTTP42858 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 RNF2P1-201ENST00000442955 1010 ntBASIC0.27□□□□□ -2.37
HTTP42858 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 RNU7-157P-201ENST00000459600 66 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 PSMC1P5-201ENST00000512850 177 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 OR10V3P-201ENST00000525712 725 ntBASIC0.27□□□□□ -2.37
HTTP42858 MIR4645-201ENST00000583158 77 ntBASIC0.27□□□□□ -2.37
HTTP42858 BNIP3P16-201ENST00000589779 534 ntBASIC0.27□□□□□ -2.37
HTTP42858 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.27□□□□□ -2.37
HTTP42858 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
HTTP42858 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.26□□□□□ -2.37
HTTP42858 RNA5SP252-201ENST00000391131 119 ntBASIC0.26□□□□□ -2.37
HTTP42858 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.26□□□□□ -2.37
HTTP42858 RPL21P66-201ENST00000426566 466 ntBASIC0.26□□□□□ -2.37
HTTP42858 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.26□□□□□ -2.37
HTTP42858 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.26□□□□□ -2.37
HTTP42858 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.26□□□□□ -2.37
HTTP42858 HMGB1P38-201ENST00000490557 577 ntBASIC0.26□□□□□ -2.37
HTTP42858 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.26□□□□□ -2.37
HTTP42858 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.26□□□□□ -2.37
HTTP42858 AC105914.1-201ENST00000511798 226 ntBASIC0.26□□□□□ -2.37
HTTP42858 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.26□□□□□ -2.37
HTTP42858 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.26□□□□□ -2.37
HTTP42858 VN1R82P-201ENST00000601481 356 ntBASIC0.26□□□□□ -2.37
HTTP42858 AL773524.1-201ENST00000614065 229 ntBASIC0.26□□□□□ -2.37
HTTP42858 LINC02211-204ENST00000642024 1070 ntBASIC0.26□□□□□ -2.37
HTTP42858 HMGB1P17-201ENST00000403495 628 ntBASIC0.26□□□□□ -2.37
HTTP42858 AC119618.1-201ENST00000434191 222 ntBASIC0.26□□□□□ -2.37
HTTP42858 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.26□□□□□ -2.37
HTTP42858 AP005639.2-201ENST00000527592 928 ntBASIC0.26□□□□□ -2.37
HTTP42858 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
HTTP42858 RPL23AP33-201ENST00000442301 452 ntBASIC0.25□□□□□ -2.37
HTTP42858 RPL31P20-201ENST00000449593 360 ntBASIC0.25□□□□□ -2.37
HTTP42858 AL513343.1-201ENST00000451818 792 ntBASIC0.25□□□□□ -2.37
HTTP42858 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.25□□□□□ -2.37
HTTP42858 NCOR1P1-202ENST00000486162 291 ntBASIC0.25□□□□□ -2.37
HTTP42858 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.25□□□□□ -2.37
HTTP42858 LDHBP3-201ENST00000514909 822 ntBASIC0.25□□□□□ -2.37
HTTP42858 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.25□□□□□ -2.37
HTTP42858 AC090666.1-201ENST00000578241 445 ntBASIC0.25□□□□□ -2.37
HTTP42858 Y_RNA.100-201ENST00000363141 102 ntBASIC0.25□□□□□ -2.37
HTTP42858 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
HTTP42858 NDUFB4P2-201ENST00000509515 391 ntBASIC0.25□□□□□ -2.37
HTTP42858 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.25□□□□□ -2.37
HTTP42858 AC078899.2-201ENST00000595282 212 ntBASIC0.25□□□□□ -2.37
HTTP42858 AL356585.4-201ENST00000623078 1229 ntBASIC0.25□□□□□ -2.37
HTTP42858 RNA5SP105-201ENST00000391123 113 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC078857.1-201ENST00000469870 667 ntBASIC0.24□□□□□ -2.37
HTTP42858 RPL30P11-201ENST00000495304 339 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.24□□□□□ -2.37
HTTP42858 SNORA44.1-201ENST00000517031 108 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.24□□□□□ -2.37
HTTP42858 RSL24D1P11-201ENST00000591045 491 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC025165.5-201ENST00000602802 578 ntBASIC0.24□□□□□ -2.37
HTTP42858 SNORD114-31-201ENST00000363219 75 ntBASIC0.24□□□□□ -2.37
HTTP42858 MIR938-201ENST00000401216 83 ntBASIC0.24□□□□□ -2.37
HTTP42858 AL512604.1-201ENST00000404812 257 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC118273.2-201ENST00000532092 465 ntBASIC0.24□□□□□ -2.37
HTTP42858 SNORD14A-201ENST00000606526 91 ntBASIC0.24□□□□□ -2.37
HTTP42858 MIR6130-201ENST00000619419 109 ntBASIC0.24□□□□□ -2.37
HTTP42858 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.24□□□□□ -2.37
HTTP42858 AL117342.1-201ENST00000404861 406 ntBASIC0.24□□□□□ -2.37
HTTP42858 RNA5SP118-201ENST00000410385 109 ntBASIC0.24□□□□□ -2.37
HTTP42858 PIGPP2-201ENST00000411569 458 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC004383.1-201ENST00000438135 289 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.24□□□□□ -2.37
HTTP42858 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.24□□□□□ -2.37
HTTP42858 MIR548AX-201ENST00000580117 73 ntBASIC0.24□□□□□ -2.37
HTTP42858 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.24□□□□□ -2.37
HTTP42858 MIR3616-201ENST00000584070 92 ntBASIC0.24□□□□□ -2.37
HTTP42858 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
HTTP42858 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HTTP42858 MIR100-201ENST00000385259 80 ntBASIC0.23□□□□□ -2.37
HTTP42858 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.23□□□□□ -2.37
HTTP42858 RPL7P29-201ENST00000437151 728 ntBASIC0.23□□□□□ -2.37
HTTP42858 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 RNU6-362P-201ENST00000516736 90 ntBASIC0.23□□□□□ -2.37
HTTP42858 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
HTTP42858 AC073410.2-201ENST00000603240 332 ntBASIC0.23□□□□□ -2.37
HTTP42858 AC021749.1-201ENST00000604322 607 ntBASIC0.23□□□□□ -2.37
HTTP42858 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.23□□□□□ -2.37
HTTP42858 AP002791.1-201ENST00000623291 381 ntBASIC0.23□□□□□ -2.37
HTTP42858 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
HTTP42858 RNU6-629P-201ENST00000384061 103 ntBASIC0.23□□□□□ -2.37
HTTP42858 SNRPGP6-201ENST00000451124 220 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms