Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD13P35453 RNU6-1083P-201ENST00000384022 107 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 RNU6-348P-201ENST00000384386 107 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 RNU6-456P-201ENST00000384493 107 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD13P35453 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD13P35453 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD13P35453 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD13P35453 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD13P35453 AC233279.1-201ENST00000455300 423 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 BTF3P15-201ENST00000455606 336 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AC023194.1-201ENST00000493084 308 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 RNA5SP76-201ENST00000516277 87 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 SNORA31.18-201ENST00000517043 134 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 COX6CP5-201ENST00000527162 228 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 OR4R1P-201ENST00000529879 463 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.03□□□□□ -1.92
HOXD13P35453 AC006362.1-201ENST00000567392 174 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD13P35453 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXD13P35453 AL391813.1-201ENST00000603098 260 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AC073648.5-201ENST00000603502 305 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 Z84480.1-201ENST00000605131 311 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AC126118.1-201ENST00000607744 628 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD13P35453 AL137790.1-201ENST00000634283 177 ntBASIC3.03□□□□□ -1.92
HOXD13P35453 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXD13P35453 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXD13P35453 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXD13P35453 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD13P35453 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD13P35453 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 RNU6-1180P-201ENST00000364935 107 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 SNORA75-201ENST00000384158 137 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 RNU6-19P-201ENST00000384718 107 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR454-201ENST00000390180 115 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR147B-201ENST00000390185 80 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 U3.26-201ENST00000391236 204 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AL138827.1-201ENST00000402666 306 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 RPL7P10-201ENST00000417407 739 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD13P35453 MTCO3P5-201ENST00000433620 714 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC107083.1-201ENST00000439643 279 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD13P35453 UBBP3-201ENST00000445497 241 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 C1DP4-201ENST00000455429 424 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD13P35453 EIF4EP3-201ENST00000498782 656 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXD13P35453 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD13P35453 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXD13P35453 MIR548AC-201ENST00000585049 88 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC008521.1-201ENST00000587471 187 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC069234.5-201ENST00000611056 416 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR6134-201ENST00000617606 109 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC099842.1-201ENST00000619919 596 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 SEPT14P19-203ENST00000633205 211 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXD13P35453 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXD13P35453 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HOXD13P35453 AC004520.1-201ENST00000608362 1413 ntBASIC3.02□□□□□ -1.93
HOXD13P35453 AC010329.5-201ENST00000623497 2174 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXD13P35453 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 RNU6-181P-201ENST00000363225 107 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 RNU6-1280P-201ENST00000365211 107 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 Y_RNA.367-201ENST00000365544 101 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD13P35453 RNU6-1042P-201ENST00000384204 107 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXD13P35453 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD13P35453 RPL23AP83-201ENST00000434984 473 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXD13P35453 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 MTCYBP1-201ENST00000454315 1119 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 RNU7-182P-201ENST00000459009 62 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AC117522.3-201ENST00000507974 584 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXD13P35453 RNU5F-8P-201ENST00000515941 111 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 RNU6-445P-201ENST00000516949 107 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 OR5AL2P-201ENST00000532185 920 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 EIF4BP1-201ENST00000554881 351 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXD13P35453 MIR5692A1-201ENST00000580523 69 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 MIR3605-201ENST00000583214 100 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 RSL24D1P11-201ENST00000591045 491 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AL645944.1-201ENST00000603857 493 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AL138889.2-201ENST00000603883 242 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 uc_338.11-201ENST00000619132 160 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 AC009161.2-201ENST00000624626 138 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
HOXD13P35453 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms