Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU1-143P-201ENST00000516296 146 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 RNU6-1038P-201ENST00000516516 104 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 RNU6-1315P-201ENST00000517187 99 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 BTF3P12-201ENST00000519620 469 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC107953.1-201ENST00000522216 297 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC022690.1-201ENST00000526681 550 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 MIR5692A1-201ENST00000580523 69 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 BNIP3P25-201ENST00000596023 559 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC092747.3-201ENST00000603769 301 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 U1.23-201ENST00000610293 146 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 RNU1-68P-201ENST00000615382 146 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC103705.1-201ENST00000619013 241 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 U1.39-201ENST00000621562 146 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 U6.98-201ENST00000637157 84 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DOBP13765 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DOBP13765 AF117829.1-206ENST00000621883 3802 ntBASIC2.9□□□□□ -1.95
HLA-DOBP13765 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DOBP13765 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AL353746.1-201ENST00000566293 6881 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DOBP13765 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DOBP13765 RNU6-797P-201ENST00000363101 109 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 Y_RNA.167-201ENST00000363735 109 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 RNU6-371P-201ENST00000364283 108 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 Y_RNA.263-201ENST00000364659 114 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 MT-TD-201ENST00000387419 68 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 BX682237.1-201ENST00000415016 335 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 YPEL5P1-201ENST00000419731 367 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC093019.1-201ENST00000443135 252 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 RNU7-167P-201ENST00000459160 62 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 KC877373.1-201ENST00000479066 408 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 RNU2-69P-201ENST00000516061 100 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 RNU1-61P-201ENST00000516107 151 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 SNORA64.4-201ENST00000516632 81 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 RN7SKP256-201ENST00000517201 314 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 IGKV2-23-201ENST00000518729 323 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AP003122.3-201ENST00000526316 255 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC084851.1-201ENST00000529105 249 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 HIGD1AP1-201ENST00000550979 275 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 MIR548AC-201ENST00000585049 88 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC022418.1-201ENST00000624118 445 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
HLA-DOBP13765 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DOBP13765 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DOBP13765 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DOBP13765 AL049641.1-201ENST00000441055 1948 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 Y_RNA.142-201ENST00000363491 102 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 SNORA4.3-201ENST00000365564 137 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 RNU6-395P-201ENST00000365662 106 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 RNU6-45P-201ENST00000384471 107 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 SNORA48.7-201ENST00000391302 135 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 EIF4E2P1-201ENST00000393781 255 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 MTND3P8-201ENST00000412909 339 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 PDCL2P1-201ENST00000419302 352 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC005300.1-201ENST00000428401 373 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 ARF4P2-201ENST00000430209 526 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AL365400.1-201ENST00000431854 640 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 PRPS1P1-201ENST00000445305 876 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 DYNLL1P5-201ENST00000467158 270 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 SNRPGP3-201ENST00000469405 227 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 RPS23P3-201ENST00000470993 430 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 TRBVA-201ENST00000498804 316 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC079140.5-201ENST00000507882 310 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 RNU6-1282P-201ENST00000516735 96 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DOBP13765 AC090115.3-201ENST00000553218 849 ntBASIC2.88□□□□□ -1.95
HLA-DOBP13765 AL157871.3-201ENST00000557231 293 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms