Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPS3AP4-201ENST00000555161 764 ntBASIC2.55□□□□□ -2
MT-ND1P03886 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.55□□□□□ -2
MT-ND1P03886 MIR1254-2-201ENST00000579553 63 ntBASIC2.55□□□□□ -2
MT-ND1P03886 AC098848.2-201ENST00000588023 330 ntBASIC2.55□□□□□ -2
MT-ND1P03886 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND1P03886 AC068790.2-201ENST00000602601 557 ntBASIC2.55□□□□□ -2
MT-ND1P03886 Z84480.1-201ENST00000605131 311 ntBASIC2.55□□□□□ -2
MT-ND1P03886 AC004492.1-201ENST00000607036 742 ntBASIC2.55□□□□□ -2
MT-ND1P03886 AC013562.2-201ENST00000611632 603 ntBASIC2.55□□□□□ -2
MT-ND1P03886 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND1P03886 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.55□□□□□ -2
MT-ND1P03886 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
MT-ND1P03886 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
MT-ND1P03886 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
MT-ND1P03886 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND1P03886 Y_RNA.245-201ENST00000364493 95 ntBASIC2.54□□□□□ -2
MT-ND1P03886 Y_RNA.296-201ENST00000364930 108 ntBASIC2.54□□□□□ -2
MT-ND1P03886 RNU6-108P-201ENST00000365558 107 ntBASIC2.54□□□□□ -2
MT-ND1P03886 RNU6-456P-201ENST00000384493 107 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC068050.1-201ENST00000394891 380 ntBASIC2.54□□□□□ -2
MT-ND1P03886 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.54□□□□□ -2
MT-ND1P03886 RNU2-39P-201ENST00000410604 198 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AL353193.1-201ENST00000421444 268 ntBASIC2.54□□□□□ -2
MT-ND1P03886 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND1P03886 MED13P1-201ENST00000428342 171 ntBASIC2.54□□□□□ -2
MT-ND1P03886 GPR143P-201ENST00000434155 205 ntBASIC2.54□□□□□ -2
MT-ND1P03886 SNRPEP9-201ENST00000436794 238 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.54□□□□□ -2
MT-ND1P03886 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 SUB1P2-201ENST00000556401 297 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND1P03886 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC025449.1-201ENST00000603896 529 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AF250324.2-201ENST00000608299 610 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AL158209.2-201ENST00000619266 216 ntBASIC2.54□□□□□ -2
MT-ND1P03886 MIR8057-201ENST00000620957 69 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC093648.1-201ENST00000623546 606 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC124864.2-201ENST00000624736 186 ntBASIC2.54□□□□□ -2
MT-ND1P03886 AC099654.12-201ENST00000639868 649 ntBASIC2.54□□□□□ -2
MT-ND1P03886 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.53□□□□□ -2
MT-ND1P03886 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.53□□□□□ -2
MT-ND1P03886 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
MT-ND1P03886 Y_RNA.367-201ENST00000365544 101 ntBASIC2.53□□□□□ -2
MT-ND1P03886 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
MT-ND1P03886 SNORA24.1-201ENST00000384401 135 ntBASIC2.53□□□□□ -2
MT-ND1P03886 Y_RNA.505-201ENST00000384489 102 ntBASIC2.53□□□□□ -2
MT-ND1P03886 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 CALM2P3-201ENST00000400429 449 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 AL592148.1-201ENST00000413568 445 ntBASIC2.53□□□□□ -2
MT-ND1P03886 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 UBE2V1P10-201ENST00000414685 269 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC092809.3-201ENST00000415453 231 ntBASIC2.53□□□□□ -2
MT-ND1P03886 BTF3L4P3-201ENST00000418879 476 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 RPS24P13-201ENST00000442520 397 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.53□□□□□ -2
MT-ND1P03886 NEFMP1-201ENST00000443423 1006 ntBASIC2.53□□□□□ -2
MT-ND1P03886 DPPA3P1-201ENST00000448050 469 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND1P03886 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
MT-ND1P03886 HMGB1P29-201ENST00000505659 499 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND1P03886 SNORA31.18-201ENST00000517043 134 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.53□□□□□ -2
MT-ND1P03886 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.53□□□□□ -2
MT-ND1P03886 AP003033.1-201ENST00000527244 415 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 AP001646.1-201ENST00000527936 915 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC016957.1-201ENST00000534895 309 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 AL359212.1-201ENST00000556608 614 ntBASIC2.53□□□□□ -2
MT-ND1P03886 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 AC024153.1-201ENST00000603103 365 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.6-201ENST00000603753 252 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.11-201ENST00000604059 253 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC008162.1-201ENST00000604718 254 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.1-201ENST00000604752 252 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.5-201ENST00000605253 252 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.12-201ENST00000605291 253 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.8-201ENST00000605353 252 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL670379.7-201ENST00000605823 252 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC092954.2-201ENST00000609103 430 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC007684.1-201ENST00000609671 477 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
MT-ND1P03886 AC034102.8-201ENST00000615146 484 ntBASIC2.53□□□□□ -2
MT-ND1P03886 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND1P03886 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms