Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS4BO75351 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS4BO75351 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 SNORD19B-201ENST00000459623 84 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC087884.1-201ENST00000469738 328 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 RPL32P34-201ENST00000486380 400 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 RPS15AP34-201ENST00000487776 387 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AL160314.1-201ENST00000490836 438 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 MTND5P5-201ENST00000503764 376 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC079140.5-201ENST00000507882 310 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS4BO75351 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 RNU6-1315P-201ENST00000517187 99 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS4BO75351 AP003122.3-201ENST00000526316 255 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC084851.1-201ENST00000529105 249 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS4BO75351 LRRC37A5P-203ENST00000580181 585 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 MIR5692A1-201ENST00000580523 69 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 MIR548AC-201ENST00000585049 88 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 AC016727.1-205ENST00000605437 569 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS4BO75351 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
VPS4BO75351 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS4BO75351 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS4BO75351 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS4BO75351 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4BO75351 RNU6-1252P-201ENST00000363054 104 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 RNU6-1227P-201ENST00000383981 107 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 U1.1-201ENST00000384101 164 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 MIR301A-201ENST00000385261 86 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 RNU6-607P-201ENST00000411283 108 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 AC074085.1-201ENST00000413598 418 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AL354751.2-201ENST00000415471 210 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 RPL21P90-201ENST00000415692 466 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AL353621.1-201ENST00000418219 243 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4BO75351 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 CYCSP35-201ENST00000451978 304 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 MTND4P17-201ENST00000470444 350 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AC022493.1-201ENST00000492984 337 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS4BO75351 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS4BO75351 COPS8P3-201ENST00000526024 482 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS4BO75351 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS4BO75351 AC011471.1-201ENST00000585766 187 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 SNORA62.6-201ENST00000606322 83 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
VPS4BO75351 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
VPS4BO75351 ZNF519P1-201ENST00000449011 1626 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS4BO75351 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 RNU6-600P-201ENST00000362524 99 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 RNU6-741P-201ENST00000383889 107 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 RNU6-128P-201ENST00000383976 107 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 Y_RNA.419-201ENST00000384041 102 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 MIR183-201ENST00000384958 110 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AL356057.2-201ENST00000403318 432 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 MIR548F5-201ENST00000408421 86 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 RNU2-3P-201ENST00000410144 191 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 RNU4-14P-201ENST00000410858 122 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 ATG3P1-201ENST00000419507 911 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 SKA2P1-201ENST00000425592 390 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AC236972.2-201ENST00000434979 310 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AC005019.1-201ENST00000436455 431 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 FABP5P14-201ENST00000437273 393 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 MTCYBP6-201ENST00000441810 138 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4BO75351 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 Y_RNA.635-201ENST00000459041 101 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 VN1R17P-201ENST00000472048 1090 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
VPS4BO75351 AC008526.1-201ENST00000509149 338 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AC008716.1-201ENST00000511084 513 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 RNU6-1153P-201ENST00000516760 105 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4BO75351 AP005639.2-201ENST00000527592 928 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4BO75351 IMMP1LP2-201ENST00000552954 492 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS4BO75351 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 MIR4738-201ENST00000579134 87 ntBASIC3.62□□□□□ -1.83
VPS4BO75351 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS4BO75351 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS4BO75351 RMST_4.1-201ENST00000616886 107 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms