Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX3O60493 AC078795.2-201ENST00000602835 1252 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC008536.2-201ENST00000607284 349 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX3O60493 AC013562.2-201ENST00000611632 603 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC104237.2-201ENST00000612456 443 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AP001486.3-201ENST00000615334 372 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX3O60493 OR5AK4P-201ENST00000635912 903 ntBASIC2.69□□□□□ -1.98
SNX3O60493 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.69□□□□□ -1.98
SNX3O60493 U6.99-201ENST00000637524 83 ntBASIC2.69□□□□□ -1.98
SNX3O60493 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNX3O60493 ZNF680P1-201ENST00000436625 1469 ntBASIC2.69□□□□□ -1.98
SNX3O60493 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
SNX3O60493 AC008669.1-201ENST00000565823 2178 ntBASIC2.68□□□□□ -1.98
SNX3O60493 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNX3O60493 HSPA8P4-201ENST00000511877 1920 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC110491.1-201ENST00000562191 2010 ntBASIC2.68□□□□□ -1.98
SNX3O60493 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 Y_RNA.41-201ENST00000362646 102 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RNU6-116P-201ENST00000384042 109 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RNU6-1029P-201ENST00000384109 107 ntBASIC2.68□□□□□ -1.98
SNX3O60493 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SNX3O60493 SNORA48.5-201ENST00000391143 135 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AL139039.1-201ENST00000401900 692 ntBASIC2.68□□□□□ -1.98
SNX3O60493 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX3O60493 USP9YP6-201ENST00000413550 854 ntBASIC2.68□□□□□ -1.98
SNX3O60493 OR51A5P-201ENST00000415429 942 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AL353193.1-201ENST00000421444 268 ntBASIC2.68□□□□□ -1.98
SNX3O60493 HMGB1P9-201ENST00000429856 646 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC091286.1-201ENST00000431233 461 ntBASIC2.68□□□□□ -1.98
SNX3O60493 MYL8P-204ENST00000431574 518 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RPL21P133-201ENST00000443666 476 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX3O60493 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX3O60493 NIPA2P5-201ENST00000452282 464 ntBASIC2.68□□□□□ -1.98
SNX3O60493 TPTE2P5-203ENST00000458118 728 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC133134.1-201ENST00000466800 359 ntBASIC2.68□□□□□ -1.98
SNX3O60493 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX3O60493 AC091435.1-201ENST00000505442 584 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RNU6-1183P-201ENST00000517054 60 ntBASIC2.68□□□□□ -1.98
SNX3O60493 SNORA31.19-201ENST00000517079 126 ntBASIC2.68□□□□□ -1.98
SNX3O60493 RNA5SP402-201ENST00000517148 110 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC023632.4-201ENST00000517783 191 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX3O60493 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX3O60493 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX3O60493 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.68□□□□□ -1.98
SNX3O60493 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.68□□□□□ -1.98
SNX3O60493 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 AC008739.2-201ENST00000597006 317 ntBASIC2.68□□□□□ -1.98
SNX3O60493 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 AL136363.2-201ENST00000604173 851 ntBASIC2.68□□□□□ -1.98
SNX3O60493 AC004777.1-201ENST00000624317 287 ntBASIC2.68□□□□□ -1.98
SNX3O60493 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX3O60493 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNX3O60493 AC096644.4-201ENST00000563417 2912 ntBASIC2.67□□□□□ -1.98
SNX3O60493 Y_RNA.126-201ENST00000363382 111 ntBASIC2.67□□□□□ -1.98
SNX3O60493 RNU6-395P-201ENST00000365662 106 ntBASIC2.67□□□□□ -1.98
SNX3O60493 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 RNU6-606P-201ENST00000384721 111 ntBASIC2.67□□□□□ -1.98
SNX3O60493 RNU6-550P-201ENST00000391057 101 ntBASIC2.67□□□□□ -1.98
SNX3O60493 PTMAP2-201ENST00000397627 327 ntBASIC2.67□□□□□ -1.98
SNX3O60493 RPS4XP8-201ENST00000402039 771 ntBASIC2.67□□□□□ -1.98
SNX3O60493 EEF1A1P40-201ENST00000412883 573 ntBASIC2.67□□□□□ -1.98
SNX3O60493 OR6C66P-201ENST00000414917 930 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 CALM2P2-201ENST00000428512 440 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 HMGN2P31-201ENST00000432430 273 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 AC098831.1-201ENST00000440661 216 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 AC104058.1-201ENST00000448028 297 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 RPL27AP5-201ENST00000469428 449 ntBASIC2.67□□□□□ -1.98
SNX3O60493 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 AC022493.1-201ENST00000492984 337 ntBASIC2.67□□□□□ -1.98
SNX3O60493 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AC107401.1-201ENST00000503426 685 ntBASIC2.67□□□□□ -1.98
SNX3O60493 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.67□□□□□ -1.98
SNX3O60493 Y_RNA.655-201ENST00000515919 96 ntBASIC2.67□□□□□ -1.98
SNX3O60493 RNA5SP503-201ENST00000517047 117 ntBASIC2.67□□□□□ -1.98
SNX3O60493 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX3O60493 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SNX3O60493 NACAP3-201ENST00000552100 481 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX3O60493 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 AC025281.1-201ENST00000567026 265 ntBASIC2.67□□□□□ -1.98
SNX3O60493 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX3O60493 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX3O60493 AL451007.1-201ENST00000595491 289 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms