Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL356596.1-201ENST00000624230 379 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC120349.2-201ENST00000625002 298 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC110079.1-202ENST00000635213 138 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC008669.1-201ENST00000565823 2178 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 Y_RNA.408-201ENST00000383987 102 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNU6-339P-201ENST00000384310 107 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNA5SP252-201ENST00000391131 119 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNA5SP465-201ENST00000391195 109 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTATP6P27-201ENST00000416987 621 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL445669.1-201ENST00000426743 755 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTND4LP10-201ENST00000435146 291 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 TAAR7P-201ENST00000436141 242 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 SSXP4-201ENST00000451349 245 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC108059.3-201ENST00000456388 214 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 SNORA70.16-201ENST00000516390 95 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1261P-201ENST00000517194 104 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC090821.2-201ENST00000523552 176 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTCYBP23-201ENST00000558717 1102 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 XIAPP1-201ENST00000603162 600 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC069431.2-201ENST00000604149 1099 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL136370.1-201ENST00000608166 691 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC018645.2-201ENST00000609151 472 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL121895.2-201ENST00000619558 447 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC123767.1-202ENST00000620407 817 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC116618.1-201ENST00000634617 774 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MIR203B-201ENST00000636080 86 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1200P-201ENST00000384162 107 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MIR627-201ENST00000384979 97 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MIR320A-201ENST00000385302 82 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 SNORA40C-201ENST00000391285 128 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 FO393413.1-201ENST00000402892 195 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC007098.1-201ENST00000420122 367 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 Z82210.1-201ENST00000440037 231 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RABEPKP1-201ENST00000440529 1026 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 PGBD4P3-201ENST00000440731 581 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RPL26P6-201ENST00000440913 438 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTND1P31-201ENST00000449206 961 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTATP6P14-201ENST00000455189 673 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL583843.1-201ENST00000456070 346 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 snoU13.4-201ENST00000458916 104 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC109445.1-201ENST00000512356 383 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 RNU6-276P-201ENST00000516114 96 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 MTCO1P47-201ENST00000523889 1271 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AP003497.1-201ENST00000528472 562 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC106900.2-201ENST00000604994 317 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC012443.1-201ENST00000605605 231 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC006270.3-201ENST00000605967 1036 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AL139022.2-201ENST00000606934 443 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 AC107075.1-201ENST00000613695 314 ntBASIC1.13□□□□□ -2.23
COL6A6A6NMZ7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RNU6-600P-201ENST00000362524 99 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1155P-201ENST00000363554 107 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 SUGT1P1-201ENST00000379514 476 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL079342.2-201ENST00000403367 482 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 CYCSP33-201ENST00000414485 327 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MRPS36P1-201ENST00000421291 307 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC092648.1-201ENST00000425870 423 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 USP12PX-201ENST00000432383 1057 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC087588.1-201ENST00000462203 316 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC104629.1-201ENST00000494226 508 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC022447.3-201ENST00000506865 495 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC105185.1-201ENST00000518705 535 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC004067.1-201ENST00000608733 700 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL391834.2-201ENST00000609982 546 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC068787.1-201ENST00000623908 691 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms