Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SNORA70.18-201ENST00000516696 98 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 RNU6-1315P-201ENST00000517187 99 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 MIR1273C-201ENST00000578669 77 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 AC073539.2-201ENST00000597113 165 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 ZNF519P1-201ENST00000449011 1626 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 AC116096.1-201ENST00000566804 2314 ntBASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPDC1A2A3K4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPDC1A2A3K4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPDC1A2A3K4 AC068647.1-201ENST00000489539 2265 ntBASIC4.15□□□□□ -1.74
PTPDC1A2A3K4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 RNU6-600P-201ENST00000362524 99 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 SNORA31-201ENST00000362607 130 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 RNA5SP72-201ENST00000364442 117 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 RHEBP3-201ENST00000411920 351 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 DBIP2-201ENST00000419076 262 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AL159987.2-201ENST00000432754 307 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 VDAC1P3-201ENST00000434069 851 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AL360271.2-201ENST00000447710 161 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 SNRPGP5-201ENST00000456003 220 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AC087884.1-201ENST00000469738 328 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 RPS27P27-201ENST00000498779 255 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AC074250.1-201ENST00000511117 192 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 RNU6-323P-201ENST00000521915 107 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AP005597.4-201ENST00000526762 229 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 IMMP1LP2-201ENST00000552954 492 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AL133215.3-201ENST00000609801 448 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AL359757.2-201ENST00000624309 274 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 AC008568.2-201ENST00000623862 2313 ntBASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPDC1A2A3K4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 RNU6-562P-201ENST00000362731 107 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 MIR490-201ENST00000384865 128 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 RN7SKP53-201ENST00000411337 315 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AC017079.2-201ENST00000416102 485 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AF228730.4-201ENST00000421457 183 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 CYCSP4-201ENST00000429682 331 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AL118496.2-201ENST00000448300 230 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.718-201ENST00000517110 102 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AC087854.1-201ENST00000519706 414 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AL121821.2-201ENST00000556081 394 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 AC022149.2-201ENST00000621061 203 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 MTND4LP32-201ENST00000636111 270 ntBASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PTPDC1A2A3K4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNA5SP50-201ENST00000363731 107 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNU6-266P-201ENST00000364225 107 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNU6-741P-201ENST00000383889 107 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 SNORD116-29-201ENST00000384516 83 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNU2-33P-201ENST00000410344 192 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 SKA2P1-201ENST00000425592 390 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 FABP5P15-201ENST00000453566 214 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC026784.1-201ENST00000507986 352 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 MTND3P25-201ENST00000509243 135 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC008716.1-201ENST00000511084 513 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNU6-1170P-201ENST00000515974 106 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 RNU6-1332P-201ENST00000516666 104 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AP004242.1-201ENST00000533701 349 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC026333.2-201ENST00000542164 106 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AC007458.1-201ENST00000542812 373 ntBASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.13□□□□□ -1.75
PTPDC1A2A3K4 AL157871.3-201ENST00000557231 293 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms