Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Gm16061-201ENSMUST00000122167 857 ntBASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Gm30025-201ENSMUST00000218555 728 ntBASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb3S4R1G7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb3S4R1G7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
H2afb3S4R1G7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb3S4R1G7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb3S4R1G7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.58□□□□□ -0.08
H2afb3S4R1G7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
H2afb3S4R1G7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms