Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Phtf1Q9QZ09 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Gm15372-201ENSMUST00000120729 834 ntBASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Rprl3-201ENSMUST00000157400 290 ntBASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Phtf1Q9QZ09 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Phtf1Q9QZ09 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Phtf1Q9QZ09 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Phtf1Q9QZ09 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Phtf1Q9QZ09 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Gm44454-201ENSMUST00000198541 138 ntBASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Phtf1Q9QZ09 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Gm17971-201ENSMUST00000190239 806 ntBASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Phtf1Q9QZ09 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Gm34391-201ENSMUST00000203706 907 ntBASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Phtf1Q9QZ09 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phtf1Q9QZ09 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Phtf1Q9QZ09 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Phtf1Q9QZ09 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms