Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm12896-201ENSMUST00000118430 226 ntBASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm6576-201ENSMUST00000169678 883 ntBASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Mir6349-201ENSMUST00000184059 97 ntBASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ush1cQ9ES64 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ush1cQ9ES64 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Gm13168-201ENSMUST00000121771 632 ntBASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Gm2559-201ENSMUST00000201323 363 ntBASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ush1cQ9ES64 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Gm27275-201ENSMUST00000184318 272 ntBASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.59■□□□□ 0.57
Ush1cQ9ES64 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ush1cQ9ES64 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1cQ9ES64 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1cQ9ES64 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1cQ9ES64 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ush1cQ9ES64 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Ush1cQ9ES64 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms