Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubb3Q9ERD7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Gm7284-201ENSMUST00000131667 944 ntBASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tubb3Q9ERD7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tubb3Q9ERD7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.09■□□□□ 0.17
Tubb3Q9ERD7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tubb3Q9ERD7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.08■□□□□ 0.16
Tubb3Q9ERD7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms