Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpne8Q9DC53 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpne8Q9DC53 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Gm10231-201ENSMUST00000181584 441 ntBASIC16.9■□□□□ 0.3
Cpne8Q9DC53 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Gm10175-202ENSMUST00000208752 441 ntBASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Cpne8Q9DC53 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.89■□□□□ 0.3
Cpne8Q9DC53 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Gm27389-201ENSMUST00000183622 195 ntBASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne8Q9DC53 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne8Q9DC53 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms