Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2aQ9DB34 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2aQ9DB34 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp2aQ9DB34 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp2aQ9DB34 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2aQ9DB34 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Gm10052-201ENSMUST00000168019 960 ntBASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Gm7729-201ENSMUST00000050143 801 ntBASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2aQ9DB34 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp2aQ9DB34 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms