Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp4cQ9D7F7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Actl10-202ENSMUST00000226583 1501 ntBASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Gm13559-201ENSMUST00000120476 863 ntBASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp4cQ9D7F7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Gm7889-201ENSMUST00000185591 958 ntBASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp4cQ9D7F7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Chmp4cQ9D7F7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp4cQ9D7F7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Gm2274-201ENSMUST00000184539 609 ntBASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Gm43799-201ENSMUST00000201845 579 ntBASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Gm10252-201ENSMUST00000209541 832 ntBASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Gm7213-201ENSMUST00000215977 950 ntBASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp4cQ9D7F7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chmp4cQ9D7F7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Mir6982-201ENSMUST00000184354 68 ntBASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chmp4cQ9D7F7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms