Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tmem88Q9D0N8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Gm13146-201ENSMUST00000118508 780 ntBASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tmem88Q9D0N8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Gm8495-201ENSMUST00000188740 694 ntBASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tmem88Q9D0N8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tmem88Q9D0N8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms