Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc80Q9D0F1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc80Q9D0F1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ndc80Q9D0F1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc80Q9D0F1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ndc80Q9D0F1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ndc80Q9D0F1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Gm11355-201ENSMUST00000121120 306 ntBASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ndc80Q9D0F1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Gm18421-201ENSMUST00000204122 625 ntBASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc80Q9D0F1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Gm37722-201ENSMUST00000193757 208 ntBASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc80Q9D0F1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms