Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Chd1lQ9CXF7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Gm7638-201ENSMUST00000121348 967 ntBASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd1lQ9CXF7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.34■□□□□ 0.53
Chd1lQ9CXF7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd1lQ9CXF7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd1lQ9CXF7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd1lQ9CXF7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms