Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrrc40Q9CRC8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Gm18032-201ENSMUST00000222541 538 ntBASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrrc40Q9CRC8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrrc40Q9CRC8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.09■□□□□ 0.17
Lrrc40Q9CRC8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrrc40Q9CRC8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrrc40Q9CRC8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Lrrc40Q9CRC8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Lrrc40Q9CRC8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lrrc40Q9CRC8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms