Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Mir6404-201ENSMUST00000183699 94 ntBASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Gm44492-201ENSMUST00000197012 141 ntBASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldnd1Q9CQX5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Gm13616-201ENSMUST00000120600 222 ntBASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Cldnd1Q9CQX5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cldnd1Q9CQX5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 AA543401-201ENSMUST00000164248 1269 ntBASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldnd1Q9CQX5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Gm27494-201ENSMUST00000184735 189 ntBASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldnd1Q9CQX5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldnd1Q9CQX5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.52■□□□□ 0.23
Cldnd1Q9CQX5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms