Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retreg3Q9CQV4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retreg3Q9CQV4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Gm6546-201ENSMUST00000192096 766 ntBASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retreg3Q9CQV4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Gm7461-201ENSMUST00000058918 827 ntBASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retreg3Q9CQV4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retreg3Q9CQV4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retreg3Q9CQV4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retreg3Q9CQV4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retreg3Q9CQV4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retreg3Q9CQV4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retreg3Q9CQV4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms