Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Gm18959-201ENSMUST00000208954 655 ntBASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H2afb1Q9CQ70 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H2afb1Q9CQ70 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H2afb1Q9CQ70 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
H2afb1Q9CQ70 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.25□□□□□ -0.29
H2afb1Q9CQ70 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb1Q9CQ70 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb1Q9CQ70 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H2afb1Q9CQ70 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms