Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim11Q99PQ2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim11Q99PQ2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.46■□□□□ 0.55
Trim11Q99PQ2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.46■□□□□ 0.55
Trim11Q99PQ2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Trim11Q99PQ2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim11Q99PQ2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim11Q99PQ2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms