Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.09■□□□□ 0.17
Trim33Q99PP7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trim33Q99PP7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trim33Q99PP7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Mir770-201ENSMUST00000103252 94 ntBASIC16.08■□□□□ 0.16
Trim33Q99PP7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.08■□□□□ 0.16
Trim33Q99PP7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trim33Q99PP7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.07■□□□□ 0.16
Trim33Q99PP7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trim33Q99PP7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.06■□□□□ 0.16
Trim33Q99PP7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim33Q99PP7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim33Q99PP7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms