Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim34aQ99PP6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Gm9727-201ENSMUST00000161387 555 ntBASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim34aQ99PP6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Gm14494-201ENSMUST00000118786 435 ntBASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Gm27702-201ENSMUST00000184512 56 ntBASIC19.92■□□□□ 0.78
Trim34aQ99PP6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Gm18622-201ENSMUST00000219361 595 ntBASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim34aQ99PP6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Gm6736-201ENSMUST00000166583 948 ntBASIC19.91■□□□□ 0.78
Trim34aQ99PP6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Rarb-207ENSMUST00000225921 2756 ntBASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim34aQ99PP6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim34aQ99PP6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim34aQ99PP6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim34aQ99PP6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim34aQ99PP6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.89■□□□□ 0.77
Trim34aQ99PP6 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms