Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Mir6420-201ENSMUST00000185032 102 ntBASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col25a1Q99MQ5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm25948-201ENSMUST00000175334 112 ntBASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Col25a1Q99MQ5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Mir8112-201ENSMUST00000184382 131 ntBASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col25a1Q99MQ5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Gm29791-202ENSMUST00000207888 369 ntBASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col25a1Q99MQ5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Gm7653-201ENSMUST00000214567 508 ntBASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col25a1Q99MQ5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms