Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scrt1Q99M85 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scrt1Q99M85 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Gm15165-201ENSMUST00000118140 502 ntBASIC14.16□□□□□ -0.14
Scrt1Q99M85 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Rprl3-201ENSMUST00000157400 290 ntBASIC14.16□□□□□ -0.14
Scrt1Q99M85 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scrt1Q99M85 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Gm13312-201ENSMUST00000119631 718 ntBASIC14.15□□□□□ -0.14
Scrt1Q99M85 Gm6736-201ENSMUST00000166583 948 ntBASIC14.15□□□□□ -0.14
Scrt1Q99M85 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.15□□□□□ -0.14
Scrt1Q99M85 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scrt1Q99M85 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms