Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdca3Q99M54 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cdca3Q99M54 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Gm45328-201ENSMUST00000210942 917 ntBASIC15.04■□□□□ -0
Cdca3Q99M54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.04■□□□□ -0
Cdca3Q99M54 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.04■□□□□ -0
Cdca3Q99M54 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdca3Q99M54 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.03■□□□□ -0
Cdca3Q99M54 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.03■□□□□ -0
Cdca3Q99M54 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdca3Q99M54 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.03■□□□□ -0
Cdca3Q99M54 Gm5864-201ENSMUST00000202263 970 ntBASIC15.03■□□□□ -0
Cdca3Q99M54 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Gm10566-201ENSMUST00000086739 996 ntBASIC15.03■□□□□ -0
Cdca3Q99M54 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdca3Q99M54 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdca3Q99M54 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.02■□□□□ -0
Cdca3Q99M54 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdca3Q99M54 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.02■□□□□ -0
Cdca3Q99M54 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdca3Q99M54 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Mir8098-201ENSMUST00000184011 137 ntBASIC15.02■□□□□ -0
Cdca3Q99M54 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Cdca3Q99M54 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdca3Q99M54 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdca3Q99M54 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Gm37722-201ENSMUST00000193757 208 ntBASIC15.01□□□□□ -0.01
Cdca3Q99M54 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdca3Q99M54 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms