Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp16Q99LG0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp16Q99LG0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp16Q99LG0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp16Q99LG0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.68■□□□□ 0.9
Usp16Q99LG0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp16Q99LG0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Gm43347-201ENSMUST00000200226 580 ntBASIC20.67■□□□□ 0.9
Usp16Q99LG0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Usp16Q99LG0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp16Q99LG0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.65■□□□□ 0.9
Usp16Q99LG0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Gm25745-201ENSMUST00000174945 133 ntBASIC20.65■□□□□ 0.9
Usp16Q99LG0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp16Q99LG0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Usp16Q99LG0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.64■□□□□ 0.89
Usp16Q99LG0 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.64■□□□□ 0.89
Usp16Q99LG0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Usp16Q99LG0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp16Q99LG0 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms