Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Mir6404-201ENSMUST00000183699 94 ntBASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Gm10175-201ENSMUST00000086013 645 ntBASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhac2Q91Y09 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Grk6-207ENSMUST00000225925 2769 ntBASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac2Q91Y09 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhac2Q91Y09 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhac2Q91Y09 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhac2Q91Y09 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Gm24513-201ENSMUST00000174964 138 ntBASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Gm27397-201ENSMUST00000184997 107 ntBASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac2Q91Y09 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac2Q91Y09 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhac2Q91Y09 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhac2Q91Y09 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms