Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb1Q91Y08 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Gm6623-201ENSMUST00000173570 544 ntBASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb1Q91Y08 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb1Q91Y08 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Gm25016-201ENSMUST00000158399 131 ntBASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb1Q91Y08 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Pcdhb1Q91Y08 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Gm6659-201ENSMUST00000174752 547 ntBASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Gm6345-202ENSMUST00000180900 204 ntBASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb1Q91Y08 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms