Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb2Q91Y00 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb2Q91Y00 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Gm28033-201ENSMUST00000184224 96 ntBASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Gm36967-201ENSMUST00000193814 266 ntBASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb2Q91Y00 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Gm13312-201ENSMUST00000119631 718 ntBASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb2Q91Y00 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb2Q91Y00 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhb2Q91Y00 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms