Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Gm13836-201ENSMUST00000121159 501 ntBASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb3Q91XZ7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb3Q91XZ7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Gm13401-201ENSMUST00000117074 291 ntBASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb3Q91XZ7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb3Q91XZ7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb3Q91XZ7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb3Q91XZ7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Gm37292-201ENSMUST00000192062 758 ntBASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb3Q91XZ7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms