Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Gm27704-201ENSMUST00000185094 107 ntBASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.98■□□□□ 0.15
Pcdhga4Q91XY4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Mir770-201ENSMUST00000103252 94 ntBASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gm29707-201ENSMUST00000196325 491 ntBASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga4Q91XY4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Gm7284-201ENSMUST00000131667 944 ntBASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhga4Q91XY4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga4Q91XY4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Phf7-203ENSMUST00000226565 1971 ntBASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga4Q91XY4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pcdhga4Q91XY4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms