Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgc3Q91XX1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Gm18558-201ENSMUST00000186253 1214 ntBASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Trmt13-210ENSMUST00000198454 880 ntBASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgc3Q91XX1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgc3Q91XX1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhgc3Q91XX1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhgc3Q91XX1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhgc3Q91XX1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Gm11249-201ENSMUST00000117071 859 ntBASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhgc3Q91XX1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhgc3Q91XX1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms