Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Olfr129-201ENSMUST00000122318 993 ntBASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Gm7284-201ENSMUST00000131667 944 ntBASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.6■□□□□ 0.25
Pcdhb11Q91UZ8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Gm27742-201ENSMUST00000184667 60 ntBASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb11Q91UZ8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb11Q91UZ8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhb11Q91UZ8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb11Q91UZ8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb11Q91UZ8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb11Q91UZ8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb11Q91UZ8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms