Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gm29707-201ENSMUST00000196325 491 ntBASIC16.78■□□□□ 0.28
Trim60Q8VI40 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim60Q8VI40 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.77■□□□□ 0.28
Trim60Q8VI40 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.77■□□□□ 0.28
Trim60Q8VI40 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim60Q8VI40 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim60Q8VI40 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim60Q8VI40 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim60Q8VI40 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim60Q8VI40 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim60Q8VI40 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim60Q8VI40 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.76■□□□□ 0.27
Trim60Q8VI40 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.76■□□□□ 0.27
Trim60Q8VI40 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim60Q8VI40 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gm11336-201ENSMUST00000118168 334 ntBASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim60Q8VI40 Gm5417-201ENSMUST00000079706 384 ntBASIC16.75■□□□□ 0.27
Trim60Q8VI40 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms