Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfpl4aQ8VH31 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfpl4aQ8VH31 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Gm12260-201ENSMUST00000122447 411 ntBASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfpl4aQ8VH31 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rfpl4aQ8VH31 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfpl4aQ8VH31 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfpl4aQ8VH31 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfpl4aQ8VH31 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Gm9727-201ENSMUST00000161387 555 ntBASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfpl4aQ8VH31 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms