Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lmcd1Q8VEE1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lmcd1Q8VEE1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Lmcd1Q8VEE1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lmcd1Q8VEE1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Gm44335-201ENSMUST00000196879 141 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Gm44297-201ENSMUST00000198304 141 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Gm44346-201ENSMUST00000198851 141 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.2■□□□□ 0.34
Lmcd1Q8VEE1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lmcd1Q8VEE1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Gm17968-201ENSMUST00000194902 784 ntBASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lmcd1Q8VEE1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Gm13365-201ENSMUST00000121188 973 ntBASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lmcd1Q8VEE1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.16■□□□□ 0.34
Lmcd1Q8VEE1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms