Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd2Q8VE28 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd2Q8VE28 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nkd2Q8VE28 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkd2Q8VE28 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Gm7461-201ENSMUST00000058918 827 ntBASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkd2Q8VE28 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkd2Q8VE28 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms