Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Gm26039-201ENSMUST00000158152 144 ntBASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lsm1Q8VC85 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lsm1Q8VC85 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lsm1Q8VC85 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Mir5130-201ENSMUST00000175160 84 ntBASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Lsm1Q8VC85 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 341 ms