Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdpf1Q8R3A2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Gm6089-201ENSMUST00000197666 938 ntBASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdpf1Q8R3A2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Gm4995-201ENSMUST00000117247 432 ntBASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Gm9727-201ENSMUST00000161387 555 ntBASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdpf1Q8R3A2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdpf1Q8R3A2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdpf1Q8R3A2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdpf1Q8R3A2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdpf1Q8R3A2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdpf1Q8R3A2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Gm6550-201ENSMUST00000187574 993 ntBASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdpf1Q8R3A2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cdpf1Q8R3A2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms