Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp7Q8R1T1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp7Q8R1T1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chmp7Q8R1T1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Gm18622-201ENSMUST00000219361 595 ntBASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp7Q8R1T1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Gm9727-201ENSMUST00000161387 555 ntBASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp7Q8R1T1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Chmp7Q8R1T1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp7Q8R1T1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms