Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm25745-201ENSMUST00000174945 133 ntBASIC15.81■□□□□ 0.12
Alms1Q8K4E0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Alms1Q8K4E0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Gm5682-201ENSMUST00000173402 505 ntBASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Alms1Q8K4E0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Gm27646-201ENSMUST00000183989 110 ntBASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Alms1Q8K4E0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Gm4459-201ENSMUST00000118750 468 ntBASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.78■□□□□ 0.12
Alms1Q8K4E0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Alms1Q8K4E0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Alms1Q8K4E0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms