Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cchcr1Q8K2I2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Gm27389-201ENSMUST00000183622 195 ntBASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cchcr1Q8K2I2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cchcr1Q8K2I2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cchcr1Q8K2I2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.15■□□□□ 0.66
Cchcr1Q8K2I2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cchcr1Q8K2I2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cchcr1Q8K2I2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cchcr1Q8K2I2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms