Protein–RNA interactions for Protein: Q8K1R7

Nek9, Serine/threonine-protein kinase Nek9, mousemouse

Predictions only

Length 984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek9Q8K1R7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nek9Q8K1R7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek9Q8K1R7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek9Q8K1R7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek9Q8K1R7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek9Q8K1R7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Gm13186-201ENSMUST00000118031 316 ntBASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek9Q8K1R7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.81■□□□□ 0.6
Nek9Q8K1R7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek9Q8K1R7 Dancr-204ENSMUST00000132389 2347 ntBASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Nek9Q8K1R7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Gm14057-201ENSMUST00000120631 482 ntBASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek9Q8K1R7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek9Q8K1R7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms